Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTGGAAGAGAGCGGCGGCCGCTCACAACATGCACAGCCTGGCGACGGCTGCGC
.(((((((((((((((.....&.))))))))........................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271635
GeneSymbolCNOT9
Binding site85,141
Score0.923
Seed1
Au0.368
Energy-20.9
Binding len41
Me-3.793
Phylopstem0.03997984307692307
Phylopflank0.43197989825
Longest consecutive pairings8
Position of longest consecutive pairings32
Pairings in 3prime end3
Position5UTR
2D Structure