Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATTGCAGCCAGCGCCAGCTCCGTGAAGCAGATGGCCGAGCTGCT
..(((((((((((((((((((&))).)))))))).)).........................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363740
GeneSymbolTSNARE1
Binding site1039,1086
Score0.846
Seed1
Au0.294
Energy-22.0
Binding len47
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings35
Pairings in 3prime end8
PositionCDS
2D Structure