Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTGAACAACTGCGGGCTGCAAG
((((((((((((((((.....&.)))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271641
GeneSymbolMTCH1
Binding site1028,1053
Score1.0
Seed1
Au0.382
Energy-24.7
Binding len19
Me-3.938
Phylopstem2.7328882352941175
Phylopflank3.567013793750001
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end3
PositionCDS
2D Structure