Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTACATTGTGTGCA
.....(((((((((((((....&))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001271644
GeneSymbolTHADA
Binding site249,263
Score0.846
Seed0
Au0.588
Energy-18.0
Binding len14
Me-13.666
Phylopstem2.3072850615384612
Phylopflank0.40194885749999987
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure