Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GACCGCGCTGCGAG
(((((((.((((((.......&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271644
GeneSymbolTHADA
Binding site11,25
Score0.846
Seed1
Au0.315
Energy-21.3
Binding len14
Me-7.22
Phylopstem-0.037725714285714286
Phylopflank-0.09749657571428574
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end1
Position5UTR
2D Structure