Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTTGAGCCAGCTCAGCGGTCAGCAGCTGTAAT
((((((((((((((((..(((&.)))..)))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271662
GeneSymbolSEMA4F
Binding site541,576
Score1.0
Seed1
Au0.412
Energy-20.8
Binding len24
Me-3.938
Phylopstem3.261601823529412
Phylopflank2.632434205
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure