Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTGTCCAACGCGCGGCCTGCAGG
(((((((((((((((..((((&))))...)))).)))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271684
GeneSymbolSLC35A3
Binding site8811,8836
Score0.846
Seed1
Au0.485
Energy-22.6
Binding len25
Me-4.171
Phylopstem-0.5359667647058823
Phylopflank0.18150562750000004
Longest consecutive pairings6
Position of longest consecutive pairings7
Pairings in 3prime end6
Position3UTR
2D Structure