Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGATGGCCTTCCAGCAGCTGTC
..((((((((((((((.(((.&))).)))))).....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271711
GeneSymbolSLC2A8
Binding site847,871
Score0.923
Seed1
Au0.397
Energy-21.1
Binding len24
Me-4.957
Phylopstem2.904991315789474
Phylopflank1.9783714049999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure