Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCATTCGCAGCTGGAT
.(.(((((((((.(((.....&))).))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271723
GeneSymbolFBXO38
Binding site2540,2556
Score0.846
Seed0
Au0.515
Energy-20.3
Binding len16
Me-6.64
Phylopstem4.215890844444445
Phylopflank5.088703564999999
Longest consecutive pairings9
Position of longest consecutive pairings3
Pairings in 3prime end3
PositionCDS
2D Structure