Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTGCAGCCAGGAGAGCAGCAGTTTGCAGCTGA
...(((((((((((((.((((&))))))))))................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271723
GeneSymbolFBXO38
Binding site1727,1761
Score0.923
Seed0
Au0.485
Energy-19.7
Binding len34
Me-6.515
Phylopstem2.744794477241379
Phylopflank3.4622385749999998
Longest consecutive pairings10
Position of longest consecutive pairings24
Pairings in 3prime end7
PositionCDS
2D Structure