Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTATATCTGCGAGTTGTGAG
((((((((((((.((((.(((&))).)))).)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271723
GeneSymbolFBXO38
Binding site337,360
Score0.833
Seed1
Au0.485
Energy-18.9
Binding len23
Me-5.227
Phylopstem5.195958692307693
Phylopflank5.4020870825
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure