Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGCAAACTGCTGCAGCGCAAC
((((.(((((((((((..(((&))).)))....)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271732
GeneSymbolYIPF5
Binding site1107,1131
Score1.0
Seed0
Au0.559
Energy-19.9
Binding len24
Me-8.057
Phylopstem1.5012939066666666
Phylopflank1.1683429225
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure