Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGTATATCGTCATTCCATCTGCAGCTGGAGCTGGAAT
((.(((((.(((((((.((((&.))))))))))).))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271742
GeneSymbolCSNK1A1
Binding site3272,3312
Score1.0
Seed0
Au0.559
Energy-22.6
Binding len22
Me-6.552
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure