Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTCAGCCACAGTTGTGAT
(((((((((.(((((.((((.&))))))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271742
GeneSymbolCSNK1A1
Binding site1552,1572
Score0.846
Seed1
Au0.574
Energy-21.0
Binding len20
Me-5.413
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
Position3UTR
2D Structure