Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAACTGCCAGAACTTGGTATTGTAGCTGCT
..(((((((((((((((....&)))))))))................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271742
GeneSymbolCSNK1A1
Binding site2294,2326
Score0.846
Seed1
Au0.5
Energy-20.2
Binding len32
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings23
Pairings in 3prime end4
Position3UTR
2D Structure