Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTAGGGCAATAATCAGTTGCAT
.((((((((..(((.(((((.&))))).)))......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271751
GeneSymbolCALCRL
Binding site5179,5203
Score1.0
Seed1
Au0.706
Energy-19.1
Binding len24
Me-8.596
Phylopstem3.4532349625000003
Phylopflank3.6728161837499993
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure