Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCATCAGGAAGTGCCAGGG
.((((((((.............&.)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001271755
GeneSymbolITGBL1
Binding site979,998
Score0.846
Seed1
Au0.382
Energy-15.7
Binding len10
Me-14.322
Phylopstem5.86360825
Phylopflank4.9688528949999995
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure