Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACGGCCGGGGCCGCTGCGAC
((((((((.(((((((..(((&)))))))))).)))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271755
GeneSymbolITGBL1
Binding site346,369
Score0.846
Seed1
Au0.235
Energy-21.6
Binding len23
Me-4.994
Phylopstem3.037928090909091
Phylopflank2.2858985924999997
Longest consecutive pairings10
Position of longest consecutive pairings13
Pairings in 3prime end6
PositionCDS
2D Structure