Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCATCAGGAAGTGCCAGGG
.((((((((.............&.)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001271756
GeneSymbolITGBL1
Binding site754,773
Score0.846
Seed1
Au0.382
Energy-15.7
Binding len10
Me-14.322
Phylopstem4.404008124999999
Phylopflank3.8092462150000004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure