Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGCACCGCGGCA
.....(((((((.(((..(((&))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271769
GeneSymbolAP3B1
Binding site104,119
Score0.846
Seed0
Au0.397
Energy-18.7
Binding len15
Me-14.955
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure