Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCACCACGCCCGTGGCTGCC
..((((((((((.(((..(((&.)))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271774
GeneSymbolRALGDS
Binding site2276,2300
Score0.846
Seed1
Au0.324
Energy-22.1
Binding len19
Me-6.246
Phylopstem5.81813
Phylopflank4.029601125
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure