Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTCGTCACTGTATGCCAT
...(((((((((.((..((...&.))..)).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001271776
GeneSymbolRALGDS
Binding site1485,1504
Score0.846
Seed0
Au0.441
Energy-15.8
Binding len18
Me-8.037
Phylopstem2.729801111111111
Phylopflank4.332272634999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure