Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTTCATCAACCGGAGTTGGGAA
((.(((((.((((((......&.)))))).))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271784
GeneSymbolFAR2
Binding site1217,1240
Score0.846
Seed0
Au0.574
Energy-19.2
Binding len17
Me-6.785
Phylopstem3.8900605333333336
Phylopflank3.012860700000001
Longest consecutive pairings6
Position of longest consecutive pairings10
Pairings in 3prime end2
PositionCDS
2D Structure