Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATGGCCGCGGCCACCAGGCGCGTGTTCCATCTGCAGC
((((((((((((((((..(((&))))))))))))))....................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363745
GeneSymbolSLC4A11
Binding site50,90
Score0.846
Seed1
Au0.338
Energy-20.0
Binding len40
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings26
Pairings in 3prime end6
Position5UTR
2D Structure