Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCAGGTGCAGCTGTGGA
(((((((((((.(((..((((&)))).))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271803
GeneSymbolREEP2
Binding site1401,1422
Score0.923
Seed1
Au0.368
Energy-23.3
Binding len21
Me-7.517
Phylopstem-0.6435391272727272
Phylopflank-0.23138137875000003
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure