Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCACCCCCTCCAATATAGTCTCGGAGCTACAACCGCAGCAGCC
..((.((((((((((((....&.)))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271814
GeneSymbolPLA2G2D
Binding site689,734
Score1.0
Seed0
Au0.529
Energy-25.1
Binding len17
Me-9.076
Phylopstem-0.14432836666666665
Phylopflank-0.36407037425
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end4
Position3UTR
2D Structure