Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACAGTGAACACAGCAGCTA
....((((((.(((((((((.&)))))))......)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271816
GeneSymbolDCLRE1A
Binding site3673,3696
Score0.923
Seed0
Au0.574
Energy-18.1
Binding len23
Me-12.371
Phylopstem0.0753302
Phylopflank0.08031098250000002
Longest consecutive pairings7
Position of longest consecutive pairings16
Pairings in 3prime end7
PositionCDS
2D Structure