Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCAACCCAAGTGGCCTTATCCGTGCAGT
((((((((((((((((.((((&))))))))))...)))))........))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271824
GeneSymbolSERPINB6
Binding site1278,1310
Score0.923
Seed1
Au0.471
Energy-19.1
Binding len32
Me-3.938
Phylopstem-0.294968337037037
Phylopflank0.7120205821153847
Longest consecutive pairings10
Position of longest consecutive pairings22
Pairings in 3prime end7
Position3UTR
2D Structure