Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCACCCTCATTGCTGTT
..(((((((.((.(((((((.&))))))).)).))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271832
GeneSymbolPTPA
Binding site2502,2523
Score0.923
Seed1
Au0.456
Energy-19.4
Binding len21
Me-7.489
Phylopstem-0.5747812857142857
Phylopflank0.021566286750000024
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure