Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCTGCATCGGCTGCT
..(((((((((((((......&))))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271833
GeneSymbolDENND2D
Binding site686,703
Score0.846
Seed1
Au0.5
Energy-19.2
Binding len17
Me-5.19
Phylopstem-0.18086084437500002
Phylopflank0.05594806000000002
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end2
PositionCDS
2D Structure