Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCAATGCCCCAGCTGCC
..(((((((.(((((.(((((&)))))))..))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271836
GeneSymbolCCDC120
Binding site540,561
Score1.0
Seed1
Au0.382
Energy-22.1
Binding len21
Me-6.433
Phylopstem1.683652857142857
Phylopflank2.42497025875
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end7
PositionCDS
2D Structure