Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGCAAGACTCGTGGCTGTGAC
((((((((((((((((((((.&))))).)))...)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271836
GeneSymbolCCDC120
Binding site301,326
Score0.846
Seed1
Au0.353
Energy-20.6
Binding len25
Me-3.938
Phylopstem0.8821506270833334
Phylopflank0.7527256862499999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure