Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGGAGGCGCTGCGGCTGCAGA
((((((((((((.(((.....&.))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271845
GeneSymbolTBC1D16
Binding site355,378
Score0.846
Seed1
Au0.368
Energy-23.5
Binding len17
Me-5.227
Phylopstem-0.6972095416666667
Phylopflank-0.6112478449999998
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure