Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACGAGTCCACGTCGGAGGAGCGGGAGGCGCTGCGGCTGCAGA
((((((((((((.(((.....&.))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271846
GeneSymbolTBC1D16
Binding site333,378
Score1.0
Seed1
Au0.368
Energy-23.5
Binding len17
Me-5.227
Phylopstem6.134485833333334
Phylopflank4.3743681875
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure