Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTGAGGATGTGGCTGTGAA
(((((((((((.....(((((&)))))......))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271848
GeneSymbolZNF700
Binding site185,208
Score0.846
Seed1
Au0.456
Energy-18.3
Binding len23
Me-10.399
Phylopstem-0.04084550000000003
Phylopflank-0.02300033000000007
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure