Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTGTGCTGGGTG
(((((((((((...........&))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001271862
GeneSymbolPNLDC1
Binding site1679,1691
Score0.846
Seed1
Au0.441
Energy-17.3
Binding len12
Me-10.399
Phylopstem-0.2934895181818182
Phylopflank-0.7028323647500003
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure