Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCTACCATAAGTTTCAGAATCTCTGCAAGTTTGATGTCAGGC
.((((((((.(((((((((...&.))))))...))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001271862
GeneSymbolPNLDC1
Binding site1374,1419
Score0.923
Seed1
Au0.559
Energy-19.5
Binding len22
Me-5.036
Phylopstem1.5552031666666668
Phylopflank1.5327433074999999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure