Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGTAACCTTGCGGCTTGGCT
..(((((((((((((((((((&)))))))))))..))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363749
GeneSymbolCSNK1D
Binding site2377,2401
Score0.923
Seed1
Au0.412
Energy-22.2
Binding len24
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings13
Pairings in 3prime end8
Position3UTR
2D Structure