Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAAAACCGTCCTGCTGCT
..(((((.((((((...((((&))))...))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363749
GeneSymbolCSNK1D
Binding site620,642
Score0.846
Seed0
Au0.5
Energy-21.4
Binding len22
Me-8.239
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end5
PositionCDS
2D Structure