Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTATAACCAAAGGAGCTGGGGG
((.(((((.(((((((.((((&))))))))))...).))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271869
GeneSymbolSZRD1
Binding site2998,3022
Score0.846
Seed0
Au0.456
Energy-19.7
Binding len24
Me-6.552
Phylopstem3.061148
Phylopflank2.2804718274999995
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure