Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGCAGCCTGTCCAGAGTGAGCTGCT
..((((((((((((((..(((&)))..)))))).))........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271870
GeneSymbolSRGAP2B
Binding site1719,1748
Score0.846
Seed1
Au0.412
Energy-20.3
Binding len29
Me-4.957
Phylopstem-0.12112504347826088
Phylopflank0.028541362499999955
Longest consecutive pairings6
Position of longest consecutive pairings18
Pairings in 3prime end6
PositionCDS
2D Structure