Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAAGGGCCCAGCTGCAGC
(((((((((.((((.(..(((&)))..).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271875
GeneSymbolCUEDC1
Binding site1739,1760
Score1.0
Seed1
Au0.368
Energy-23.0
Binding len21
Me-5.916
Phylopstem0.5575421777777777
Phylopflank0.26307598000000004
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure