Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCCCACAGCCCCGCTGTGGT
(((((((.(.((((((((((.&))))...))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271889
GeneSymbolCIB2
Binding site831,854
Score0.846
Seed1
Au0.338
Energy-18.7
Binding len23
Me-7.494
Phylopstem4.146870538461539
Phylopflank4.351716292499999
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end7
Position3UTR
2D Structure