Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCAACTCTGATATGCTAGGTT
((((((((((((..((.((...&)).))..)).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001271900
GeneSymbolPPP2R2B
Binding site3880,3901
Score1.0
Seed1
Au0.735
Energy-17.1
Binding len21
Me-6.084
Phylopstem0.32337142307692307
Phylopflank-0.07395017499999995
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure