Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAAAGCAGCTGCT
..((((((((.......((((&))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271904
GeneSymbolGSKIP
Binding site2235,2251
Score0.846
Seed1
Au0.647
Energy-18.2
Binding len16
Me-14.243
Phylopstem0.7424763624999999
Phylopflank0.2633964517499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure