Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCTGCT
..((((((((...........&)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271905
GeneSymbolGSKIP
Binding site1721,1730
Score0.846
Seed1
Au0.647
Energy-17.4
Binding len9
Me-14.243
Phylopstem1.223481625
Phylopflank1.0464708539999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure