Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGAGAAACTGCAGCCCCCTTCTCCAGTGCTCTGGGGGAGGGTGCAC
.(((((((((((((.((((((&))))))...)))))))))...........................)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271909
GeneSymbolSPATA33
Binding site1252,1302
Score0.846
Seed1
Au0.338
Energy-20.4
Binding len50
Me-4.529
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings32
Pairings in 3prime end7
Position3UTR
2D Structure