Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGCTACCACACTCATGGGTCACTGGGGCTGCGCAGGGCTCTT
(((((((((((((((((((..&.)))).....))))))))..)))).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001330683
GeneSymbolTTC3
Binding site6521,6563
Score0.846
Seed1
Au0.441
Energy-25.0
Binding len29
Me-3.938
Phylopstem-0.17108650370370374
Phylopflank0.407952145
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end6
Position3UTR
2D Structure