Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACGCGGAGTACCTCGGTGGGTCTCTGCAGCTGCAGTCCCTGCAGG
(((((((((((((((((((((&.))))...........)))))))))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271926
GeneSymbolBCKDK
Binding site1396,1445
Score0.923
Seed1
Au0.353
Energy-24.4
Binding len37
Me-3.938
Phylopstem4.286071448571427
Phylopflank3.9422772275
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end8
Position3UTR
2D Structure