Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACAGCCTCTCAGAGCAGCTGTT
..((((((((((((((..(((&))))))))).......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001271935
GeneSymbolTK2
Binding site1862,1887
Score0.808
Seed1
Au0.441
Energy-21.7
Binding len25
Me-4.957
Phylopstem-0.1825715952380953
Phylopflank-0.159461558
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end6
Position3UTR
2D Structure